Изменены функции для генерации документации

CMLibDocBreathe.cmake

@@ -3,7 +3,7 @@ set_property(CACHE BREATHE_FOUND PROPERTY STRINGS ON OFF AUTO)
 
 find_package(Doxygen)
 find_package(Perl)
-set(Python_ADDITIONAL_VERSIONS 3.8;3.7;3.6;3.5;3.4;3.3;3.2)
+set(Python_ADDITIONAL_VERSIONS 3.9;3.8;3.7;3.6;3.5;3.4;3.3;3.2)
 find_package(PythonInterp)
 if(PYTHONINTERP_FOUND)
   find_package(Sphinx)
@@ -24,7 +24,7 @@ else()
   set(BREATHE_FOUND OFF CACHE STRING "Breathe documentation generator disabled" FORCE)
 endif()
 
-function(add_breathe target)
+function(add_breathe_target target)
   set(options)
   set(oneValueArgs COMMENT)
   set(multiValueArgs)
@@ -36,8 +36,8 @@ function(add_breathe target)
     set(GENERATE_XML YES)
     set(GENERATE_HTML NO)
     set(GENERATE_LATEX NO)
-    set(CONF_FILE ${CMAKE_SOURCE_DIR}/cmake/doc/breathe-conf.py.in)
-    set(DOXY_FILE ${CMAKE_SOURCE_DIR}/cmake/doc/Doxyfile.in)
+    set(CONF_FILE ${CMLIB_MODULE_DIR}/doxygen/breathe-conf.py.in)
+    set(DOXY_FILE ${CMLIB_MODULE_DIR}/doxygen/Doxyfile.in)
 
     configure_file(${CONF_FILE} ${WORK_DIR}/conf.py @ONLY)
     configure_file(${DOXY_FILE} ${WORK_DIR}/Doxyfile @ONLY)
@@ -68,6 +68,9 @@ function(add_breathe target)
                                                               ${RST_FILES} ${WORK_DIR})
       endif()
     endif()
+    install(DIRECTORY ${CMAKE_BINARY_DIR}/doc/breathe/
+            COMPONENT doc OPTIONAL
+            DESTINATION ${CMAKE_INSTALL_DATADIR}/doc/breathe)
   else()
     message(STATUS "CMLIB warning:")
     add_custom_target(${target} VERBATIM COMMENT "  Breathe is not found. Skipping target ${target} build")

CMLibDocDoxygen.cmake

@@ -8,7 +8,7 @@ else()
   set(DOXYGEN_FOUND OFF CACHE STRING "Doxygen documentation generator disabled" FORCE)
 endif()
 
-function(add_doxygen target)
+function(add_doxygen_target target)
   set(options)
   set(oneValueArgs SQLITE LATEX HTML)
   set(multiValueArgs)
@@ -26,7 +26,7 @@ function(add_doxygen target)
     endif()
 
     set(work_dir ${CMAKE_BINARY_DIR}/doc/doxygen)
-    configure_file(${CMAKE_SOURCE_DIR}/cmake/doc/Doxyfile.in ${work_dir}/Doxyfile @ONLY)
+    configure_file(${CMLIB_MODULE_DIR}/doxygen/Doxyfile.in ${work_dir}/Doxyfile @ONLY)
 
     add_custom_target(
       ${target}
@@ -35,6 +35,9 @@ function(add_doxygen target)
       COMMAND ${DOXYGEN_EXECUTABLE} ${work_dir}/Doxyfile
       WORKING_DIRECTORY ${work_dir}
       COMMENT "Generating API documentation with Doxygen")
+    install(DIRECTORY ${CMAKE_BINARY_DIR}/doc/doxygen/html/
+            COMPONENT doc OPTIONAL
+            DESTINATION ${CMAKE_INSTALL_DATADIR}/doc/doxygen)
   else()
     message(STATUS "CMLIB warning:")
     add_custom_target(${target} VERBATIM COMMENT "  Doxygen is not found. Skipping target ${target} build")

doxygen/Doxyfile.in

@@ -0,0 +1,383 @@
+# Doxyfile 1.8.16
+
+#---------------------------------------------------------------------------
+# Project related configuration options
+#---------------------------------------------------------------------------
+DOXYFILE_ENCODING      = UTF-8
+PROJECT_NAME           = "@DOXYGEN_PROJECT_TITLE@"
+PROJECT_NUMBER         =
+PROJECT_BRIEF          =
+PROJECT_LOGO           =
+OUTPUT_DIRECTORY       = "@OUTPUT_DIRECTORY@"
+CREATE_SUBDIRS         = NO
+ALLOW_UNICODE_NAMES    = NO
+OUTPUT_LANGUAGE        = Russian
+OUTPUT_TEXT_DIRECTION  = None
+BRIEF_MEMBER_DESC      = YES
+REPEAT_BRIEF           = YES
+ABBREVIATE_BRIEF       = "The $name class" \
+                         "The $name widget" \
+                         "The $name file" \
+                         is \
+                         provides \
+                         specifies \
+                         contains \
+                         represents \
+                         a \
+                         an \
+                         the
+ALWAYS_DETAILED_SEC    = NO
+INLINE_INHERITED_MEMB  = NO
+FULL_PATH_NAMES        = YES
+STRIP_FROM_PATH        = "@CMAKE_SOURCE_DIR@/src"
+STRIP_FROM_INC_PATH    = "@CMAKE_SOURCE_DIR@/src"
+SHORT_NAMES            = NO
+JAVADOC_AUTOBRIEF      = NO
+JAVADOC_BANNER         = NO
+QT_AUTOBRIEF           = NO
+MULTILINE_CPP_IS_BRIEF = NO
+INHERIT_DOCS           = YES
+SEPARATE_MEMBER_PAGES  = NO
+TAB_SIZE               = 4
+ALIASES                =
+TCL_SUBST              =
+OPTIMIZE_OUTPUT_FOR_C  = NO
+OPTIMIZE_OUTPUT_JAVA   = NO
+OPTIMIZE_FOR_FORTRAN   = NO
+OPTIMIZE_OUTPUT_VHDL   = NO
+OPTIMIZE_OUTPUT_SLICE  = NO
+EXTENSION_MAPPING      =
+MARKDOWN_SUPPORT       = YES
+TOC_INCLUDE_HEADINGS   = 5
+AUTOLINK_SUPPORT       = YES
+BUILTIN_STL_SUPPORT    = NO
+CPP_CLI_SUPPORT        = NO
+SIP_SUPPORT            = NO
+IDL_PROPERTY_SUPPORT   = YES
+DISTRIBUTE_GROUP_DOC   = NO
+GROUP_NESTED_COMPOUNDS = NO
+SUBGROUPING            = YES
+INLINE_GROUPED_CLASSES = NO
+INLINE_SIMPLE_STRUCTS  = NO
+TYPEDEF_HIDES_STRUCT   = NO
+LOOKUP_CACHE_SIZE      = 0
+#---------------------------------------------------------------------------
+# Build related configuration options
+#---------------------------------------------------------------------------
+EXTRACT_ALL            = YES
+EXTRACT_PRIVATE        = YES
+EXTRACT_PRIV_VIRTUAL   = NO
+EXTRACT_PACKAGE        = NO
+EXTRACT_STATIC         = YES
+EXTRACT_LOCAL_CLASSES  = YES
+EXTRACT_LOCAL_METHODS  = YES
+EXTRACT_ANON_NSPACES   = NO
+HIDE_UNDOC_MEMBERS     = NO
+HIDE_UNDOC_CLASSES     = NO
+HIDE_FRIEND_COMPOUNDS  = NO
+HIDE_IN_BODY_DOCS      = NO
+INTERNAL_DOCS          = NO
+CASE_SENSE_NAMES       = NO
+HIDE_SCOPE_NAMES       = NO
+HIDE_COMPOUND_REFERENCE= NO
+SHOW_INCLUDE_FILES     = YES
+SHOW_GROUPED_MEMB_INC  = NO
+FORCE_LOCAL_INCLUDES   = NO
+INLINE_INFO            = YES
+SORT_MEMBER_DOCS       = YES
+SORT_BRIEF_DOCS        = NO
+SORT_MEMBERS_CTORS_1ST = NO
+SORT_GROUP_NAMES       = NO
+SORT_BY_SCOPE_NAME     = NO
+STRICT_PROTO_MATCHING  = NO
+GENERATE_TODOLIST      = YES
+GENERATE_TESTLIST      = YES
+GENERATE_BUGLIST       = YES
+GENERATE_DEPRECATEDLIST= YES
+ENABLED_SECTIONS       =
+MAX_INITIALIZER_LINES  = 30
+SHOW_USED_FILES        = YES
+SHOW_FILES             = YES
+SHOW_NAMESPACES        = YES
+FILE_VERSION_FILTER    =
+LAYOUT_FILE            =
+CITE_BIB_FILES         =
+#---------------------------------------------------------------------------
+# Configuration options related to warning and progress messages
+#---------------------------------------------------------------------------
+QUIET                  = NO
+WARNINGS               = YES
+WARN_IF_UNDOCUMENTED   = YES
+WARN_IF_DOC_ERROR      = YES
+WARN_NO_PARAMDOC       = NO
+WARN_AS_ERROR          = NO
+WARN_FORMAT            = "$file:$line: $text"
+WARN_LOGFILE           =
+#---------------------------------------------------------------------------
+# Configuration options related to the input files
+#---------------------------------------------------------------------------
+INPUT                  = "@PROJECT_SOURCE_DIR@/src" \
+                         "@PROJECT_SOURCE_DIR@/doc/html"
+INPUT_ENCODING         = UTF-8
+FILE_PATTERNS          = *.c \
+                         *.cc \
+                         *.cxx \
+                         *.cpp \
+                         *.c++ \
+                         *.java \
+                         *.ii \
+                         *.ixx \
+                         *.ipp \
+                         *.i++ \
+                         *.inl \
+                         *.idl \
+                         *.ddl \
+                         *.odl \
+                         *.h \
+                         *.hh \
+                         *.hxx \
+                         *.hpp \
+                         *.h++ \
+                         *.cs \
+                         *.d \
+                         *.php \
+                         *.php4 \
+                         *.php5 \
+                         *.phtml \
+                         *.inc \
+                         *.m \
+                         *.markdown \
+                         *.md \
+                         *.mm \
+                         *.dox \
+                         *.py \
+                         *.pyw \
+                         *.f90 \
+                         *.f95 \
+                         *.f03 \
+                         *.f08 \
+                         *.f \
+                         *.for \
+                         *.tcl \
+                         *.vhd \
+                         *.vhdl \
+                         *.ucf \
+                         *.qsf
+RECURSIVE              = YES
+EXCLUDE                =
+EXCLUDE_SYMLINKS       = NO
+EXCLUDE_PATTERNS       =
+EXCLUDE_SYMBOLS        =
+EXAMPLE_PATH           =
+EXAMPLE_PATTERNS       = *
+EXAMPLE_RECURSIVE      = NO
+IMAGE_PATH             =
+INPUT_FILTER           =
+FILTER_PATTERNS        =
+FILTER_SOURCE_FILES    = NO
+FILTER_SOURCE_PATTERNS =
+USE_MDFILE_AS_MAINPAGE =
+#---------------------------------------------------------------------------
+# Configuration options related to source browsing
+#---------------------------------------------------------------------------
+SOURCE_BROWSER         = NO
+INLINE_SOURCES         = NO
+STRIP_CODE_COMMENTS    = YES
+REFERENCED_BY_RELATION = NO
+REFERENCES_RELATION    = NO
+REFERENCES_LINK_SOURCE = YES
+SOURCE_TOOLTIPS        = YES
+USE_HTAGS              = NO
+VERBATIM_HEADERS       = YES
+CLANG_ASSISTED_PARSING = NO
+CLANG_OPTIONS          =
+CLANG_DATABASE_PATH    =
+#---------------------------------------------------------------------------
+# Configuration options related to the alphabetical class index
+#---------------------------------------------------------------------------
+ALPHABETICAL_INDEX     = YES
+COLS_IN_ALPHA_INDEX    = 5
+IGNORE_PREFIX          =
+#---------------------------------------------------------------------------
+# Configuration options related to the HTML output
+#---------------------------------------------------------------------------
+GENERATE_HTML          = @GENERATE_HTML@
+HTML_OUTPUT            = html
+HTML_FILE_EXTENSION    = .html
+HTML_HEADER            =
+HTML_FOOTER            =
+HTML_STYLESHEET        =
+HTML_EXTRA_STYLESHEET  =
+HTML_EXTRA_FILES       =
+HTML_COLORSTYLE_HUE    = 220
+HTML_COLORSTYLE_SAT    = 100
+HTML_COLORSTYLE_GAMMA  = 80
+HTML_TIMESTAMP         = NO
+HTML_DYNAMIC_MENUS     = YES
+HTML_DYNAMIC_SECTIONS  = NO
+HTML_INDEX_NUM_ENTRIES = 100
+GENERATE_DOCSET        = NO
+DOCSET_FEEDNAME        = "Doxygen generated docs"
+DOCSET_BUNDLE_ID       = org.doxygen.Project
+DOCSET_PUBLISHER_ID    = org.doxygen.Publisher
+DOCSET_PUBLISHER_NAME  = Publisher
+GENERATE_HTMLHELP      = NO
+CHM_FILE               =
+HHC_LOCATION           =
+GENERATE_CHI           = NO
+CHM_INDEX_ENCODING     =
+BINARY_TOC             = NO
+TOC_EXPAND             = NO
+GENERATE_QHP           = NO
+QCH_FILE               =
+QHP_NAMESPACE          = org.doxygen.Project
+QHP_VIRTUAL_FOLDER     = doc
+QHP_CUST_FILTER_NAME   =
+QHP_CUST_FILTER_ATTRS  =
+QHP_SECT_FILTER_ATTRS  =
+QHG_LOCATION           =
+GENERATE_ECLIPSEHELP   = NO
+ECLIPSE_DOC_ID         = org.doxygen.Project
+DISABLE_INDEX          = NO
+GENERATE_TREEVIEW      = YES
+ENUM_VALUES_PER_LINE   = 4
+TREEVIEW_WIDTH         = 250
+EXT_LINKS_IN_WINDOW    = NO
+FORMULA_FONTSIZE       = 10
+FORMULA_TRANSPARENT    = YES
+USE_MATHJAX            = NO
+MATHJAX_FORMAT         = HTML-CSS
+MATHJAX_RELPATH        = https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.2/
+MATHJAX_EXTENSIONS     =
+MATHJAX_CODEFILE       =
+SEARCHENGINE           = YES
+SERVER_BASED_SEARCH    = NO
+EXTERNAL_SEARCH        = NO
+SEARCHENGINE_URL       =
+SEARCHDATA_FILE        = searchdata.xml
+EXTERNAL_SEARCH_ID     =
+EXTRA_SEARCH_MAPPINGS  =
+#---------------------------------------------------------------------------
+# Configuration options related to the LaTeX output
+#---------------------------------------------------------------------------
+GENERATE_LATEX         = @GENERATE_LATEX@
+LATEX_OUTPUT           = latex
+LATEX_CMD_NAME         = latex
+MAKEINDEX_CMD_NAME     = makeindex
+LATEX_MAKEINDEX_CMD    = makeindex
+COMPACT_LATEX          = NO
+PAPER_TYPE             = a4
+EXTRA_PACKAGES         =
+LATEX_HEADER           =
+LATEX_FOOTER           =
+LATEX_EXTRA_STYLESHEET =
+LATEX_EXTRA_FILES      =
+PDF_HYPERLINKS         = YES
+USE_PDFLATEX           = YES
+LATEX_BATCHMODE        = NO
+LATEX_HIDE_INDICES     = NO
+LATEX_SOURCE_CODE      = NO
+LATEX_BIB_STYLE        = plain
+LATEX_TIMESTAMP        = NO
+LATEX_EMOJI_DIRECTORY  =
+#---------------------------------------------------------------------------
+# Configuration options related to the RTF output
+#---------------------------------------------------------------------------
+GENERATE_RTF           = NO
+RTF_OUTPUT             = rtf
+COMPACT_RTF            = NO
+RTF_HYPERLINKS         = NO
+RTF_STYLESHEET_FILE    =
+RTF_EXTENSIONS_FILE    =
+RTF_SOURCE_CODE        = NO
+#---------------------------------------------------------------------------
+# Configuration options related to the man page output
+#---------------------------------------------------------------------------
+GENERATE_MAN           = NO
+MAN_OUTPUT             = man
+MAN_EXTENSION          = .3
+MAN_SUBDIR             =
+MAN_LINKS              = NO
+#---------------------------------------------------------------------------
+# Configuration options related to the XML output
+#---------------------------------------------------------------------------
+GENERATE_XML           = @GENERATE_XML@
+XML_OUTPUT             = xml
+XML_PROGRAMLISTING     = YES
+XML_NS_MEMB_FILE_SCOPE = NO
+#---------------------------------------------------------------------------
+# Configuration options related to the DOCBOOK output
+#---------------------------------------------------------------------------
+GENERATE_DOCBOOK       = NO
+DOCBOOK_OUTPUT         = docbook
+DOCBOOK_PROGRAMLISTING = NO
+#---------------------------------------------------------------------------
+# Configuration options for the AutoGen Definitions output
+#---------------------------------------------------------------------------
+GENERATE_AUTOGEN_DEF   = NO
+#---------------------------------------------------------------------------
+# Configuration options related to the Perl module output
+#---------------------------------------------------------------------------
+GENERATE_PERLMOD       = NO
+PERLMOD_LATEX          = NO
+PERLMOD_PRETTY         = YES
+PERLMOD_MAKEVAR_PREFIX =
+#---------------------------------------------------------------------------
+# Configuration options related to the preprocessor
+#---------------------------------------------------------------------------
+ENABLE_PREPROCESSING   = YES
+MACRO_EXPANSION        = NO
+EXPAND_ONLY_PREDEF     = NO
+SEARCH_INCLUDES        = YES
+INCLUDE_PATH           =
+INCLUDE_FILE_PATTERNS  =
+PREDEFINED             =
+EXPAND_AS_DEFINED      =
+SKIP_FUNCTION_MACROS   = YES
+#---------------------------------------------------------------------------
+# Configuration options related to external references
+#---------------------------------------------------------------------------
+TAGFILES               =
+GENERATE_TAGFILE       =
+ALLEXTERNALS           = NO
+EXTERNAL_GROUPS        = YES
+EXTERNAL_PAGES         = YES
+#---------------------------------------------------------------------------
+# Configuration options related to the dot tool
+#---------------------------------------------------------------------------
+CLASS_DIAGRAMS         = YES
+DIA_PATH               =
+HIDE_UNDOC_RELATIONS   = YES
+HAVE_DOT               = YES
+DOT_NUM_THREADS        = 0
+DOT_FONTNAME           = Helvetica
+DOT_FONTSIZE           = 10
+DOT_FONTPATH           =
+CLASS_GRAPH            = YES
+COLLABORATION_GRAPH    = YES
+GROUP_GRAPHS           = YES
+UML_LOOK               = YES
+UML_LIMIT_NUM_FIELDS   = 10
+TEMPLATE_RELATIONS     = YES
+INCLUDE_GRAPH          = YES
+INCLUDED_BY_GRAPH      = YES
+CALL_GRAPH             = YES
+CALLER_GRAPH           = YES
+GRAPHICAL_HIERARCHY    = YES
+DIRECTORY_GRAPH        = YES
+DOT_IMAGE_FORMAT       = png
+INTERACTIVE_SVG        = YES
+DOT_PATH               = @DOXYGEN_DOT_PATH@
+DOTFILE_DIRS           =
+MSCFILE_DIRS           =
+DIAFILE_DIRS           =
+PLANTUML_JAR_PATH      =
+PLANTUML_CFG_FILE      =
+PLANTUML_INCLUDE_PATH  =
+DOT_GRAPH_MAX_NODES    = 50
+MAX_DOT_GRAPH_DEPTH    = 0
+DOT_TRANSPARENT        = NO
+DOT_MULTI_TARGETS      = NO
+GENERATE_LEGEND        = YES
+DOT_CLEANUP            = YES
+

doxygen/breathe-conf.py.in

@@ -0,0 +1,185 @@
+#!@PYTHON_EXECUTABLE@
+# -*- coding: utf-8 -*-
+#
+
+import os
+import subprocess
+import sys
+
+# -- General configuration ------------------------------------------------
+
+# At top on conf.py (with other import statements)
+import recommonmark
+from recommonmark.parser import CommonMarkParser
+from recommonmark.transform import AutoStructify
+from recommonmark.states import DummyStateMachine
+# Monkey patch to fix recommonmark 0.4 doc reference issues.
+orig_run_role = DummyStateMachine.run_role
+def run_role(self, name, options=None, content=None):
+    if name == 'doc':
+        name = 'any'
+    return orig_run_role(self, name, options, content)
+DummyStateMachine.run_role = run_role
+
+source_parsers = {
+    '.md': CommonMarkParser
+}
+
+# If your documentation needs a minimal Sphinx version, state it here.
+#
+# needs_sphinx = '1.0'
+
+# Add any Sphinx extension module names here, as strings. They can be
+# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
+# ones.
+extensions = [
+    'breathe', 'sphinx.ext.autosectionlabel', 'recommonmark'
+]
+
+# Add any paths that contain templates here, relative to this directory.
+templates_path = ['_templates']
+
+# The suffix(es) of source filenames.
+# You can specify multiple suffix as a list of string:
+#
+source_suffix = ['.rst', '.md']
+
+# The master toctree document.
+master_doc = 'index'
+
+# General information about the project.
+project = '@DOXYGEN_PROJECT_TITLE@'
+author = '@AUTHOR_NAME@'
+copyright = '@CMLIB_YEAR@, ' + author
+
+# The version info for the project you're documenting, acts as replacement for
+# |version| and |release|, also used in various other places throughout the
+# built documents.
+#
+# The short X.Y version.
+version = '@PROJECT_VERSION@'
+# The full version, including alpha/beta/rc tags.
+release = ''
+
+# The language for content autogenerated by Sphinx. Refer to documentation
+# for a list of supported languages.
+#
+# This is also used if you do content translation via gettext catalogs.
+# Usually you set "language" from the command line for these cases.
+language = None
+
+# List of patterns, relative to source directory, that match files and
+# directories to ignore when looking for source files.
+# This patterns also effect to html_static_path and html_extra_path
+exclude_patterns = ['_build', '_output', 'Thumbs.db', '.DS_Store']
+
+# The name of the Pygments (syntax highlighting) style to use.
+pygments_style = 'sphinx'
+
+# If true, `todo` and `todoList` produce output, else they produce nothing.
+todo_include_todos = False
+
+# -- Options for HTML output ----------------------------------------------
+
+# The theme to use for HTML and HTML Help pages.  See the documentation for
+# a list of builtin themes.
+#
+html_theme = 'sphinx_rtd_theme'
+
+# Theme options are theme-specific and customize the look and feel of a theme
+# further.  For a list of options available for each theme, see the
+# documentation.
+#
+# html_theme_options = {}
+
+# Add any paths that contain custom static files (such as style sheets) here,
+# relative to this directory. They are copied after the builtin static files,
+# so a file named "default.css" will overwrite the builtin "default.css".
+html_static_path = []
+
+# Custom sidebar templates, must be a dictionary that maps document names
+# to template names.
+#
+# This is required for the alabaster theme
+# refs: http://alabaster.readthedocs.io/en/latest/installation.html#sidebars
+html_sidebars = {
+    '**': [
+        'relations.html',  # needs 'show_related': True theme option to display
+        'searchbox.html',
+    ]
+}
+
+# -- Options for HTMLHelp output ------------------------------------------
+
+# Output file base name for HTML help builder.
+htmlhelp_basename = '@PROJECT_NAME@doc'
+
+# -- Options for LaTeX output ---------------------------------------------
+
+latex_elements = {
+    # The paper size ('letterpaper' or 'a4paper').
+    #
+    # 'papersize': 'letterpaper',
+
+    # The font size ('10pt', '11pt' or '12pt').
+    #
+    # 'pointsize': '10pt',
+
+    # Additional stuff for the LaTeX preamble.
+    #
+    # 'preamble': '',
+
+    # Latex figure (float) alignment
+    #
+    # 'figure_align': 'htbp',
+}
+
+# Grouping the document tree into LaTeX files. List of tuples
+# (source start file, target name, title,
+#  author, documentclass [howto, manual, or own class]).
+latex_documents = [
+    (master_doc, '@PROJECT_NAME@.tex', '@PROJECT_NAME@ Documentation',
+     author, 'manual'),
+]
+
+# -- Options for manual page output ---------------------------------------
+
+# One entry per manual page. List of tuples
+# (source start file, name, description, authors, manual section).
+man_pages = [(master_doc, '@PROJECT_NAME@', '@PROJECT_NAME@ Documentation', [author], 1)]
+
+# -- Options for Texinfo output -------------------------------------------
+
+# Grouping the document tree into Texinfo files. List of tuples
+# (source start file, target name, title, author,
+#  dir menu entry, description, category)
+texinfo_documents = [
+    (master_doc, '@PROJECT_NAME@', '@PROJECT_NAME@ Documentation', author, '@PROJECT_NAME@',
+     'One line description of project.', 'Miscellaneous'),
+]
+
+breathe_projects = {'@PROJECT_NAME@': '@BREATHE_DOCS_BUILD_DIR@/xml'}
+
+
+def run_doxygen(folder):
+    """Run the doxygen make command in the designated folder"""
+
+    try:
+        retcode = subprocess.call("cd {}; doxygen".format(folder), shell=True)
+        if retcode < 0:
+            sys.stderr.write(
+                "doxygen terminated by signal {}".format(-retcode))
+    except OSError as e:
+        sys.stderr.write("doxygen execution failed: {}".format(e))
+
+
+def setup(app):
+    run_doxygen('@BREATHE_DOCS_BUILD_DIR@')
+    app.add_config_value('recommonmark_config', {
+        'enable_auto_toc_tree': True,
+        'enable_eval_rst': True,
+        'enable_auto_doc_ref': True,
+        'enable_math': True,
+        'enable_inline_math': True
+        }, True)
+    app.add_transform(AutoStructify)